PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00001.1.g00560.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 327aa    MW: 35992 Da    PI: 6.702
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00001.1.g00560.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like41.53e-134368126
                       G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                                  kprl+WtpeLHerFveav+qLGG+e 
  Zjn_sc00001.1.g00560.1.am.mk 43 KPRLKWTPELHERFVEAVNQLGGPEM 68
                                  79*********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.5E-114167IPR009057Homeodomain-like
PfamPF143792.5E-999120IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
PfamPF143792.6E-11149173IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MYHQQQLESH KQHLSSRPSL PHEKQFLLQG GGDSGLILST DAKPRLKWTP ELHERFVEAV  60
NQLGGPEMSG SRTATDKLCE GNGSPSSHFA LEPQMNRSMH ISEALQMQIE VQRRLHEQLE  120
PLNPVPERGQ AARGGDGGRS YQPFRRPPVQ RHLQLRIEAQ GKYLQSVLEK AQEALAKQSV  180
GVDGDVLGLE EDAASFKAPH PLPRPELTAN ASTKRQQHGV GDGSVDSCLT ACERDQHEML  240
SIGLCTTPRR SSQFGDGRRA SEEYMFLEEP SRGASAPGEN RCGEIRRNDG LGNARTAELL  300
GLSITHNSSS CPSRDGDRID LNGSTWN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004958726.12e-93PREDICTED: myb family transcription factor APL-like
TrEMBLA0A0A9DHX61e-105A0A0A9DHX6_ARUDO; Uncharacterized protein
STRINGSi030350m1e-90(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2098744
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.32e-45G2-like family protein